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com.daylight
Class Conformation

java.lang.Object
  extended by com.daylight.DaylightCppObject
      extended by com.daylight.DaylightObject
          extended by com.daylight.Conformation

public class Conformation
extends DaylightObject

Object representing a conformation object

Field Summary
 
Fields inherited from class com.daylight.DaylightCppObject
ref
 
Constructor Summary
Conformation(ConnectedAtomCollection molOrReaction)
          from dt_alloc_conformation.
 
Method Summary
 Conformation copy()
          from dt_copy.
protected  void finalize()
          Called by the garbage collector on an object when garbage collection determines that there are no more references to the object.
 Point3D getCoordinate(Atom atom)
          from dt_getcoord.
 void projectOnto(Depiction depiction)
          from dt_project.
 void rotate(float vecX, float vecY, float vecZ, float angleInRadians)
          from dt_rotate.
 void scale(float scaleX, float scaleY, float scaleZ)
          from dt_scale.
 void setCoordinate(Atom atom, float x, float y, float z)
          from dt_setcoord.
 void translate(float addX, float addY, float addZ)
          from dt_translate.
 void zeroCoordinates()
          from dt_zerocoord.
 
Methods inherited from class com.daylight.DaylightObject
appendStringProperty, checkProgramLicense, checkToolkitLicense, clearErrors, disableVirtualHandles, equals, getAdjunct, getAncestor, getBase, getBooleanProperty, getChiralClass, getChiralOrder, getCount, getErrors, getExistingObjectCount, getHandleProperty, getIntegerProperty, getParent, getPropertyNames, getPropertyType, getRealProperty, getRuntimeLibraryCreationDate, getRuntimeLibraryVersion, getStream, getStringProperty, getType, getTypename, getUniqueId, getUniqueIdRange, getWorstErrorType, hashCode, isNullObject, mpInitialize, mpLock, mpTrylock, mpUnlock, saveError, setAdjunct, setBooleanProperty, setHandleProperty, setIntegerProperty, setRealProperty, setStringProperty
 
Methods inherited from class java.lang.Object
clone, getClass, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

Conformation

public Conformation(ConnectedAtomCollection molOrReaction)
             throws DaylightException
from dt_alloc_conformation.

Throws:
DaylightException
Method Detail

copy

public Conformation copy()
                  throws DaylightException
from dt_copy.

Throws:
DaylightException

getCoordinate

public Point3D getCoordinate(Atom atom)
                      throws DaylightException
from dt_getcoord.

Throws:
DaylightException

setCoordinate

public void setCoordinate(Atom atom,
                          float x,
                          float y,
                          float z)
                   throws DaylightException
from dt_setcoord.

Throws:
DaylightException

rotate

public void rotate(float vecX,
                   float vecY,
                   float vecZ,
                   float angleInRadians)
            throws DaylightException
from dt_rotate.

Throws:
DaylightException

scale

public void scale(float scaleX,
                  float scaleY,
                  float scaleZ)
           throws DaylightException
from dt_scale.

Throws:
DaylightException

translate

public void translate(float addX,
                      float addY,
                      float addZ)
               throws DaylightException
from dt_translate.

Throws:
DaylightException

zeroCoordinates

public void zeroCoordinates()
                     throws DaylightException
from dt_zerocoord.

Throws:
DaylightException

projectOnto

public void projectOnto(Depiction depiction)
                 throws DaylightException
from dt_project.

Throws:
DaylightException

finalize

protected void finalize()
                 throws java.lang.Throwable
Called by the garbage collector on an object when garbage collection determines that there are no more references to the object.

Overrides:
finalize in class DaylightObject
Throws:
java.lang.Throwable
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