Daycgi Worksheet - Daylight CGI applications

Daycgi is comprised of a set of web appications which use the tool set in the $DY_ROOT/daycgi directory. Daycgi is not a toolkit, but rather a set of utilities which enable chemical information delivery via a CGI script. For example, the shell script smi2gif generates a gif depiction from a SMILES string, which enables 2-D chemical structures to be added to web pages. See the class notes for Day 2 for information on writing your own CGI application with Daycgi tools.

1. Lookup compounds and their assoicated data from each of the databases with daycgi interfaces (WDI, Spresi, Medchem).
   • Start netscape
   • Open the url http://sun1/dayhtml
   • Select a daycgi inteface to one of the listed databases
   • Select Invoke JavaGrins with from the menu and hit submit
   • Draw in a structure
   • Using the "File" menu of JavaGrins, select Grins to SMILES, then select submit.
2. Lookup a datatree by name and by SMILES using Hyperthor
3. Generate an MCL script with Wizard
4. Generate HTML output from the command line with the MCL script from Step 3.
   • Change the first line to read: Select database "medchem98demo%@sun1"
   • mcl -h -i myprog.mcl

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